All functions

check_variable_info()

Check Variable Information

create_relation_network()

Create a Relationship Network

demo_data

Demo data

enrich_pathway()

Enrich Pathways

enriched_functional_module

enriched_functional_module

export_functional_module()

Export Functional Module Analysis Results to Excel

export_module_info_plot()

Export Module Information Plot

functional_module-class

An S4 class to represent enriched pathways

get_go_result_sim()

Pathway Enrichment Analysis and GO Similarity Measurement

get_jaccard_index_for_three_databases()

get_jaccard_index_for_three_databases Function

get_mapa_version()

Retrieve the Version of mapa Package

mapa_conflicts()

Conflicts between the mapa and other packages

mapa_logo()

Display the mapa Logo

mapa_packages()

List all packages in the mapa

merge_modules()

Identify Functional Modules Across Different Databases

merge_pathways()

Merge Pathways from Multiple Databases

merge_pathways_internal()

Merge Pathway Enrichment Results Internally

plot_module_info()

Plot Module Information for Enrichment Analysis

plot_pathway_bar()

Plot Pathway Bar Chart

plot_relationship_network()

Plot Relationship Network

plot_similarity_network()

Plot Similarity Network