Software

Web app 21

TidyMassShiny

TidyMassShiny is a Shiny application that provides an interactive interface for the TidyMass project, enabling users to perform comprehensive …

Metabolomics 2025

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R ecosystem 620+

TidyMass

TidyMass project is a comprehensive computational framework that can process the whole workflow of data processing and analysis for LC-MS-based …

Metabolomics 2020

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R package 110+

metID

metID is a R packge which is used for metabolite identification based on in-house database and public database based on accurate mass, retention time …

Metabolomics 2020

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AI tool 34

deepPseudoMSI

The deepPseudoMSI project is the first method that convert LC-MS raw data to “images” and then process them using deep learning method for diagnosis.

Metabolomics 2020

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Pipeline 18

lagCI

lagCI combines sliding windows, LOESS smoothing and bootstrap correction to estimate robust lagged correlations, and identify the causal relationships …

Multi-omics 2025

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AI tool 28

MAPA

MAPA is a software for pathway-enrichment analysis and enrichment result interpretation using Large Language Modes (LLMs) that turns complex …

Multi-omics 2025

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R ecosystem 120+

TidyMicrobiome

TidyMicrobiome project is a comprehensive computational framework that can process the whole workflow of data processing and analysis for microbiome …

Multi-omics 2022

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Resource 12

R cookbook

This is myself note book for R study.

Others 2020

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